Nicola K Dinsdale
I am currently working as a post-doctoral research associate in the Oxford
Machine Learning in NeuroImaging Lab (OMNI), working with Dr. Ana
Namburete, in the Department of Computer Science.
I studied for my DPhil (PhD) in the Analysis Group at the Wellcome Centre for Integrative
Neuroimaging at the University of Oxford, where I researched deep
learning based approaches for neuroimaging analysis, supervised by Prof. Mark
Jenkinson and Dr. Ana
Namburete, funded by the UKRI EPRSC/MRC as part of the ONBI DTC.
My research uses computer vision and deep learning to solve medical imaging
problems. I am especially interested in exploring methods to overcome the
barriers to clinical translatability of deep learning methods and robust deep
learning, and I am open to collabortion opportunities.
Email  / 
Google
Scholar  / 
Github
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UniFed: A unified deep learning framework for
segmentation of partially labelled, distributed
neuroimaging data
Nicola K Dinsdale, Mark Jenkinson, Ana IL Namburete
bioRxiv, 2024
Project Page / Paper / Code
We propose UniFed, a unified federated harmonisation framework, which enables three key processes to be completed: 1) the training of a federated partially labelled
harmonisation network, 2) the selection of the most appropriate pretrained model for a new unseen
site, and 3) the incorporation of a new site into the harmonised federation.
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Anatomically plausible segmentations: Explicitly preserving topology through prior deformations
Madeleine K Wyburd, Nicola K Dinsdale , Ana IL Namburete, Mark Jenkinson
Medical Image Analysis 2024
Paper / Code
Our model, TEDS-Net, generates anatomically plausible segmentations through deforming a prior shape with the same topology as the anatomy of interest.
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QAERTS: Geometric Transformation Uncertainty for Improving 3D Fetal Brain Pose Prediction from Freehand 2D Ultrasound Videos
Jayroop Ramesh, Nicola K Dinsdale, the INTERGROWTH-21st Consortium, Pak-Hei Yeung, Ana IL Namburete
MICCAI 2024 [Early Acceptance - top 11%]
Paper / Code
We propose an uncertainty-aware deep learning model for automated 3D plane localization in 2D fetal brain images.
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Is Your Style Transfer Doing Anything Useful? An Investigation Into Hippocampus Segmentation and the Role of Preprocessing
Hoda Kalabizadeh, Ludovica Griffanti, Pak-Hei Yeung, Natalie Voets, Grace Gillis, Clare E Mackay, Ana IL Namburete, Nicola K Dinsdale*, Konstantinos Kamnitsas*
Machine Learning in Clinical Neuroimaging, 2024
Paper
We investigated the performance of segmentation models trained on research data that were style-transferred to resemble clinical scans. Our results highlighted the importance of intensity normalisation methods in MRI segmentation, and their relation to domain shift and style-transfer.
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